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Computational Problem Solving in the Chemical Sciences - Home Computational Problem Solving in the Chemical Sciences - Home
  • Welcome to Computational Problem Solving in the Chemical Sciences

Part 1. Introduction to Python Computations

  • Chapter 1: Introduction to Python for the Chemical Sciences
  • Chapter 2: Essential Python Packages for the Chemical Sciences
  • Chapter 3: Control Structures in Python

Part 2. Numerical Methods in Python

  • Chapter 4: Chemical Reaction Equilibria and Roots of Equations
  • Chapter 5: Chemical Bonding and Numerical Integration
  • Chapter 6: Balancing Chemical Equations and Systems of Linear Algebraic Equations

Part 3. Statistics — Regression and Correlation

  • Chapter 7: Orders of Reaction and Linear Regression Analysis
  • Chapter 8: Calibration Data, Confidence Intervals, and Correlation Analysis

Part 4. Introduction to Molecular Simulations

  • Chapter 9: Classical Thermodynamics
  • Chapter 10: Statistical Thermodynamics
  • Chapter 11: Ensembles and Ergodicity

Part 5. Monte Carlo Simulations

  • Chapter 12: The Monte Carlo Method
  • Chapter 13: Monte Carlo Integration
  • Chapter 14: A Basic Monte Carlo Algorithm
  • Chapter 15: Nanoparticle Shape and Simulated Annealing
  • Chapter 16: Technical Details: Boundary Conditions, Truncation of Interactions, Etc.
  • Chapter 17: Lipid Interactions in Membranes and Monte Carlo Simulations
  • Chapter 18: Monte Carlo Simulations of Adsorption on Surfaces
  • Project 1: Grand Canonical Monte Carlo Simulations of Competitive Adsorption

Part 6. Molecular Dynamics Simulations

  • Chapter 19: Molecular Dynamics
  • Chapter 20: Verlet Integration
  • Chapter 21: Thermostatting
  • Chapter 22: Atomic Simulation Environment (ASE)
  • Chapter 23: Radial Distribution Function
  • Project 2: Molecular Dynamics Simulations of a Polymer Chain

Part 7. Advanced and Emerging Topics in Computational Chemistry

  • Chapter 24: Newton-Raphson Method
  • Chapter 25: Kinetic Monte Carlo
  • Chapter 26: scikit-learn
  • Chapter 27: Nested Sampling
  • Repository
  • Open issue

Index

By Robert B. Wexler

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